Multi-locus placement of unknown taxa sequences with user-customizable metadata on eleven included reference trees
Multi-locus placement on user-uploaded reference tree, multi-locus sequence alignments and metadata
Standardization of phylogenetic placement and metadata output using Metadata Enhanced PhyloXML (MEP)
Perform cumulative placement of unknown taxa sequences on reference tree
Multiple phylogeny-based placement options: EPA and EPA-NG, backbone constraint tree, and de novo phylogenetic reconstruction using RAxML and IQ-TREE
BLAST Assignment
Pre-filtering and/or classification of unknown nrITS or 16S rDNA barcode sequences using the UNITE fungal nrITS database or SILVA bacterial database
Option to select specific clades and perform phylogenetic inference across single or multiple alignments with RAxML or network inference using TCS and NetworkX
Tree Editing and Visualization
Color editor for synchronizing color-coded attributes across subtrees and networks
Display metadata as colorized outer rings in phylogenies
